FUNCTION_TITLE

FUNCTION_DESCRIPTION

msigdb(
  category = c("H", "C2", "C5"),
  subcategory = NULL,
  exclude.subcategory = "HPO",
  split.by.subcategory = F,
  species = "Homo sapiens",
  annotation = c("gene_symbol", "entrez_gene"),
  return.dataframe = F
)

Arguments

category

PARAM_DESCRIPTION, Default: c("H", "C2", "C5")

subcategory

PARAM_DESCRIPTION, Default: NULL

exclude.subcategory

PARAM_DESCRIPTION, Default: 'HPO'

split.by.subcategory

PARAM_DESCRIPTION, Default: F

species

PARAM_DESCRIPTION, Default: 'Homo sapiens'

annotation

PARAM_DESCRIPTION, Default: c("gene_symbol", "entrez_gene")

return.dataframe

PARAM_DESCRIPTION, Default: F

Value

OUTPUT_DESCRIPTION

Details

DETAILS

See also

msigdbr filter

Examples

if (FALSE) {
if(interactive()){
 #EXAMPLE1
 }
}